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Aliphatic Amino Acids

Aliphatic R groups are nonpolar and hydrophobic. Hydrophobicity increases with increasing number of C atoms in the hydrocarbon chain. Although these amino acids prefer to remain inside protein molecules, alanine and glycine are ambivalent, meaning that they can be inside or outside the protein molecule. Glycine has such a small side chain that it does not have much effect on the hydrophobic interactions.

The structures below are shown in the ionization state that predominates at pH 7.

Molecular Structure of Glycine NH2-CH2-COOH Molecualar Structure of Alanine CH3-CH(NH3)-COO- Molecular structure of valine (CH3)2-CH-CH(NH3)-COO Molecular Structure for Leucine (CH3)2-CH-CH2-CH(NH3)-COOMolecular Structure of Isoleucine CH3-CH2-CH(CH3)-CH(NH3)-COO
Less hydrophobic More hydrophobic
Chemical structure for glycine Chemical structure for alanine Chemcial structure for valine chemical structure of valine Chemical structure for isoleucine

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The Biology Project > Biochemistry > The Chemistry of Amino Acids


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August 25, 2003
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